CAIAP (CAI Analyser PAckage) Server
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Compare diferent CUTs and CAI distributions by means of bar or line plot.
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Organism 1:
Acidobacteria_bacterium_Ellin345
Acidothermus_cellulolyticus_11B
Acidovorax_JS42
Acidovorax_avenae_citrulli_AAC00-1
Acinetobacter_baumannii_ATCC_17978
Acinetobacter_sp_ADP1
Actinobacillus_pleuropneumoniae_L20
Aeromonas_hydrophila_ATCC_7966
Aeropyrum_pernix
Agrobacterium_tumefaciens_C58_Cereon
Agrobacterium_tumefaciens_C58_UWash
Alcanivorax_borkumensis_SK2
Alkalilimnicola_ehrlichei_MLHE-1
Anabaena_variabilis_ATCC_29413
Anaeromyxobacter_dehalogenans_2CP-C
Anaplasma_marginale_St_Maries
Anaplasma_phagocytophilum_HZ
Aquifex_aeolicus
Archaeoglobus_fulgidus
Arthrobacter_FB24
Arthrobacter_aurescens_TC1
Aster_yellows_witches-broom_phytoplasma_AYWB
Azoarcus_BH72
Azoarcus_sp_EbN1
Bacillus_anthracis_Ames
Bacillus_anthracis_Ames_0581
Bacillus_anthracis_str_Sterne
Bacillus_cereus_ATCC14579
Bacillus_cereus_ATCC_10987
Bacillus_cereus_ZK
Bacillus_clausii_KSM-K16
Bacillus_halodurans
Bacillus_licheniformis_ATCC_14580
Bacillus_licheniformis_DSM_13
Bacillus_subtilis
Bacillus_thuringiensis_Al_Hakam
Bacillus_thuringiensis_konkukian
Bacteroides_fragilis_NCTC_9434
Bacteroides_fragilis_YCH46
Bacteroides_thetaiotaomicron_VPI-5482
Bartonella_bacilliformis_KC583
Bartonella_henselae_Houston-1
Bartonella_quintana_Toulouse
Baumannia_cicadellinicola_Homalodisca_coagulata
Bdellovibrio_bacteriovorus
Bifidobacterium_adolescentis_ATCC_15703
Bifidobacterium_longum
Bordetella_bronchiseptica
Bordetella_parapertussis
Bordetella_pertussis
Borrelia_afzelii_PKo
Borrelia_burgdorferi
Borrelia_garinii_PBi
Bradyrhizobium_japonicum
Brucella_abortus_9-941
Brucella_melitensis
Brucella_melitensis_biovar_Abortus
Brucella_suis_1330
Buchnera_aphidicola
Buchnera_aphidicola_Cc_Cinara_cedri
Buchnera_aphidicola_Sg
Buchnera_sp
Burkholderia_383
Burkholderia_cenocepacia_AU_1054
Burkholderia_cenocepacia_HI2424
Burkholderia_cepacia_AMMD
Burkholderia_mallei_ATCC_23344
Burkholderia_mallei_NCTC_10229
Burkholderia_mallei_NCTC_10247
Burkholderia_mallei_SAVP1
Burkholderia_pseudomallei_1106a
Burkholderia_pseudomallei_1710b
Burkholderia_pseudomallei_668
Burkholderia_pseudomallei_K96243
Burkholderia_thailandensis_E264
Burkholderia_xenovorans_LB400
Campylobacter_fetus_82-40
Campylobacter_jejuni
Campylobacter_jejuni_81-176
Campylobacter_jejuni_RM1221
Candidatus_Blochmannia_floridanus
Candidatus_Blochmannia_pennsylvanicus_BPEN
Candidatus_Carsonella_ruddii
Candidatus_Carsonella_ruddii_PV
Candidatus_Pelagibacter_ubique_HTCC1062
Candidatus_Ruthia_magnifica_Cm_Calyptogena_magnifica_
Carboxydothermus_hydrogenoformans_Z-2901
Caulobacter_crescentus
Chlamydia_muridarum
Chlamydia_trachomatis
Chlamydia_trachomatis_A_HAR-13
Chlamydophila_abortus_S26_3
Chlamydophila_caviae
Chlamydophila_felis_Fe_C-56
Chlamydophila_pneumoniae_AR39
Chlamydophila_pneumoniae_CWL029
Chlamydophila_pneumoniae_J138
Chlamydophila_pneumoniae_TW_183
Chlorobium_chlorochromatii_CaD3
Chlorobium_phaeobacteroides_DSM_266
Chlorobium_tepidum_TLS
Chromobacterium_violaceum
Chromohalobacter_salexigens_DSM_3043
Clostridium_acetobutylicum
Clostridium_difficile_630
Clostridium_novyi_NT
Clostridium_perfringens
Clostridium_perfringens_ATCC_13124
Clostridium_perfringens_SM101
Clostridium_tetani_E88
Clostridium_thermocellum_ATCC_27405
Colwellia_psychrerythraea_34H
Corynebacterium_diphtheriae
Corynebacterium_efficiens_YS-314
Corynebacterium_glutamicum_ATCC_13032_Bielefeld
Corynebacterium_glutamicum_ATCC_13032_Kitasato
Corynebacterium_jeikeium_K411
Coxiella_burnetii
Cyanobacteria_bacterium_Yellowstone_A-Prime
Cyanobacteria_bacterium_Yellowstone_B-Prime
Cytophaga_hutchinsonii_ATCC_33406
Dechloromonas_aromatica_RCB
Dehalococcoides_CBDB1
Dehalococcoides_ethenogenes_195
Deinococcus_geothermalis_DSM_11300
Deinococcus_radiodurans
Desulfitobacterium_hafniense_Y51
Desulfotalea_psychrophila_LSv54
Desulfovibrio_desulfuricans_G20
Desulfovibrio_vulgaris_DP4
Desulfovibrio_vulgaris_Hildenborough
Ehrlichia_canis_Jake
Ehrlichia_chaffeensis_Arkansas
Ehrlichia_ruminantium_Gardel
Ehrlichia_ruminantium_Welgevonden
Enterococcus_faecalis_V583
Erwinia_carotovora_atroseptica_SCRI1043
Erythrobacter_litoralis_HTCC2594
Escherichia_coli_536
Escherichia_coli_APEC_O1
Escherichia_coli_CFT073
Escherichia_coli_K12
Escherichia_coli_O157H7
Escherichia_coli_O157H7_EDL933
Escherichia_coli_UTI89
Escherichia_coli_W3110
Francisella_tularensis_FSC_198
Francisella_tularensis_holarctica
Francisella_tularensis_holarctica_OSU18
Francisella_tularensis_novicida_U112
Francisella_tularensis_tularensis
Frankia_CcI3
Frankia_alni_ACN14a
Fusobacterium_nucleatum
Geobacillus_kaustophilus_HTA426
Geobacter_metallireducens_GS-15
Geobacter_sulfurreducens
Gloeobacter_violaceus
Gluconobacter_oxydans_621H
Gramella_forsetii_KT0803
Granulobacter_bethesdensis_CGDNIH1
Haemophilus_ducreyi_35000HP
Haemophilus_influenzae
Haemophilus_influenzae_86_028NP
Haemophilus_somnus_129PT
Hahella_chejuensis_KCTC_2396
Haloarcula_marismortui_ATCC_43049
Halobacterium_sp
Haloquadratum_walsbyi
Halorhodospira_halophila_SL1
Helicobacter_acinonychis_Sheeba
Helicobacter_hepaticus
Helicobacter_pylori_26695
Helicobacter_pylori_HPAG1
Helicobacter_pylori_J99
Hyperthermus_butylicus
Hyphomonas_neptunium_ATCC_15444
Idiomarina_loihiensis_L2TR
Jannaschia_CCS1
Lactobacillus_acidophilus_NCFM
Lactobacillus_brevis_ATCC_367
Lactobacillus_casei_ATCC_334
Lactobacillus_delbrueckii_bulgaricus
Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365
Lactobacillus_gasseri_ATCC_33323
Lactobacillus_johnsonii_NCC_533
Lactobacillus_plantarum
Lactobacillus_sakei_23K
Lactobacillus_salivarius_UCC118
Lactococcus_lactis
Lactococcus_lactis_cremoris_MG1363
Lactococcus_lactis_cremoris_SK11
Lawsonia_intracellularis_PHE_MN1-00
Legionella_pneumophila_Lens
Legionella_pneumophila_Paris
Legionella_pneumophila_Philadelphia_1
Leifsonia_xyli_xyli_CTCB0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_JB197
Leptospira_borgpetersenii_serovar_Hardjo-bovis_L550
Leptospira_interrogans_serovar_Copenhageni
Leptospira_interrogans_serovar_Lai
Leuconostoc_mesenteroides_ATCC_8293
Listeria_innocua
Listeria_monocytogenes
Listeria_monocytogenes_4b_F2365
Listeria_welshimeri_serovar_6b_SLCC5334
Magnetococcus_MC-1
Magnetospirillum_magneticum_AMB-1
Mannheimia_succiniciproducens_MBEL55E
Maricaulis_maris_MCS10
Marinobacter_aquaeolei_VT8
Mesoplasma_florum_L1
Mesorhizobium_BNC1
Mesorhizobium_loti
Methanobacterium_thermoautotrophicum
Methanococcoides_burtonii_DSM_6242
Methanococcus_jannaschii
Methanococcus_maripaludis_S2
Methanocorpusculum_labreanum_Z
Methanoculleus_marisnigri_JR1
Methanopyrus_kandleri
Methanosaeta_thermophila_PT
Methanosarcina_acetivorans
Methanosarcina_barkeri_fusaro
Methanosarcina_mazei
Methanosphaera_stadtmanae
Methanospirillum_hungatei_JF-1
Methylibium_petroleiphilum_PM1
Methylobacillus_flagellatus_KT
Methylococcus_capsulatus_Bath
Moorella_thermoacetica_ATCC_39073
Mycobacterium_JLS
Mycobacterium_KMS
Mycobacterium_MCS
Mycobacterium_avium_104
Mycobacterium_avium_paratuberculosis
Mycobacterium_bovis
Mycobacterium_bovis_BCG_Pasteur_1173P2
Mycobacterium_leprae
Mycobacterium_smegmatis_MC2_155
Mycobacterium_tuberculosis_CDC1551
Mycobacterium_tuberculosis_H37Rv
Mycobacterium_ulcerans_Agy99
Mycobacterium_vanbaalenii_PYR-1
Mycoplasma_capricolum_ATCC_27343
Mycoplasma_gallisepticum
Mycoplasma_genitalium
Mycoplasma_hyopneumoniae_232
Mycoplasma_hyopneumoniae_7448
Mycoplasma_hyopneumoniae_J
Mycoplasma_mobile_163K
Mycoplasma_mycoides
Mycoplasma_penetrans
Mycoplasma_pneumoniae
Mycoplasma_pulmonis
Mycoplasma_synoviae_53
Myxococcus_xanthus_DK_1622
Nanoarchaeum_equitans
Natronomonas_pharaonis
Neisseria_gonorrhoeae_FA_1090
Neisseria_meningitidis_FAM18
Neisseria_meningitidis_MC58
Neisseria_meningitidis_Z2491
Neorickettsia_sennetsu_Miyayama
Nitrobacter_hamburgensis_X14
Nitrobacter_winogradskyi_Nb-255
Nitrosococcus_oceani_ATCC_19707
Nitrosomonas_europaea
Nitrosomonas_eutropha_C71
Nitrosospira_multiformis_ATCC_25196
Nocardia_farcinica_IFM10152
Nocardioides_JS614
Nostoc_sp
Novosphingobium_aromaticivorans_DSM_12444
Oceanobacillus_iheyensis
Oenococcus_oeni_PSU-1
Onion_yellows_phytoplasma
Parachlamydia_sp_UWE25
Paracoccus_denitrificans_PD1222
Pasteurella_multocida
Pediococcus_pentosaceus_ATCC_25745
Pelobacter_carbinolicus
Pelobacter_propionicus_DSM_2379
Pelodictyon_luteolum_DSM_273
Photobacterium_profundum_SS9
Photorhabdus_luminescens
Picrophilus_torridus_DSM_9790
Pirellula_sp
Polaromonas_JS666
Polaromonas_naphthalenivorans_CJ2
Porphyromonas_gingivalis_W83
Prochlorococcus_marinus_AS9601
Prochlorococcus_marinus_CCMP1375
Prochlorococcus_marinus_MED4
Prochlorococcus_marinus_MIT9313
Prochlorococcus_marinus_MIT_9301
Prochlorococcus_marinus_MIT_9303
Prochlorococcus_marinus_MIT_9312
Prochlorococcus_marinus_MIT_9515
Prochlorococcus_marinus_NATL1A
Prochlorococcus_marinus_NATL2A
Propionibacterium_acnes_KPA171202
Pseudoalteromonas_atlantica_T6c
Pseudoalteromonas_haloplanktis_TAC125
Pseudomonas_aeruginosa
Pseudomonas_aeruginosa_UCBPP-PA14
Pseudomonas_entomophila_L48
Pseudomonas_fluorescens_Pf-5
Pseudomonas_fluorescens_PfO-1
Pseudomonas_putida_KT2440
Pseudomonas_syringae_phaseolicola_1448A
Pseudomonas_syringae_pv_B728a
Pseudomonas_syringae_tomato_DC3000
Psychrobacter_arcticum_273-4
Psychrobacter_cryohalolentis_K5
Psychromonas_ingrahamii_37
Pyrobaculum_aerophilum
Pyrobaculum_calidifontis_JCM_11548
Pyrobaculum_islandicum_DSM_4184
Pyrococcus_abyssi
Pyrococcus_furiosus
Pyrococcus_horikoshii
Ralstonia_eutropha_H16
Ralstonia_eutropha_JMP134
Ralstonia_metallidurans_CH34
Ralstonia_solanacearum
Rhizobium_etli_CFN_42
Rhizobium_leguminosarum_bv_viciae_3841
Rhodobacter_sphaeroides_2_4_1
Rhodobacter_sphaeroides_ATCC_17029
Rhodococcus_RHA1
Rhodoferax_ferrireducens_T118
Rhodopseudomonas_palustris_BisA53
Rhodopseudomonas_palustris_BisB18
Rhodopseudomonas_palustris_BisB5
Rhodopseudomonas_palustris_CGA009
Rhodopseudomonas_palustris_HaA2
Rhodospirillum_rubrum_ATCC_11170
Rickettsia_bellii_RML369-C
Rickettsia_conorii
Rickettsia_felis_URRWXCal2
Rickettsia_prowazekii
Rickettsia_typhi_wilmington
Roseobacter_denitrificans_OCh_114
Rubrobacter_xylanophilus_DSM_9941
Saccharophagus_degradans_2-40
Salinibacter_ruber_DSM_13855
Salmonella_enterica_Choleraesuis
Salmonella_enterica_Paratypi_ATCC_9150
Salmonella_typhi
Salmonella_typhi_Ty2
Salmonella_typhimurium_LT2
Shewanella_ANA-3
Shewanella_MR-4
Shewanella_MR-7
Shewanella_W3-18-1
Shewanella_amazonensis_SB2B
Shewanella_baltica_OS155
Shewanella_denitrificans_OS217
Shewanella_frigidimarina_NCIMB_400
Shewanella_loihica_PV-4
Shewanella_oneidensis
Shigella_boydii_Sb227
Shigella_dysenteriae
Shigella_flexneri_2a
Shigella_flexneri_2a_2457T
Shigella_flexneri_5_8401
Shigella_sonnei_Ss046
Silicibacter_TM1040
Silicibacter_pomeroyi_DSS-3
Sinorhizobium_meliloti
Sodalis_glossinidius_morsitans
Solibacter_usitatus_Ellin6076
Sphingopyxis_alaskensis_RB2256
Staphylococcus_aureus_COL
Staphylococcus_aureus_MW2
Staphylococcus_aureus_Mu50
Staphylococcus_aureus_N315
Staphylococcus_aureus_NCTC_8325
Staphylococcus_aureus_RF122
Staphylococcus_aureus_USA300
Staphylococcus_aureus_aureus_MRSA252
Staphylococcus_aureus_aureus_MSSA476
Staphylococcus_epidermidis_ATCC_12228
Staphylococcus_epidermidis_RP62A
Staphylococcus_haemolyticus
Staphylococcus_saprophyticus
Staphylothermus_marinus_F1
Streptococcus_agalactiae_2603
Streptococcus_agalactiae_A909
Streptococcus_agalactiae_NEM316
Streptococcus_mutans
Streptococcus_pneumoniae_D39
Streptococcus_pneumoniae_R6
Streptococcus_pneumoniae_TIGR4
Streptococcus_pyogenes_M1_GAS
Streptococcus_pyogenes_MGAS10270
Streptococcus_pyogenes_MGAS10394
Streptococcus_pyogenes_MGAS10750
Streptococcus_pyogenes_MGAS2096
Streptococcus_pyogenes_MGAS315
Streptococcus_pyogenes_MGAS5005
Streptococcus_pyogenes_MGAS6180
Streptococcus_pyogenes_MGAS8232
Streptococcus_pyogenes_MGAS9429
Streptococcus_pyogenes_SSI-1
Streptococcus_sanguinis_SK36
Streptococcus_thermophilus_CNRZ1066
Streptococcus_thermophilus_LMD-9
Streptococcus_thermophilus_LMG_18311
Streptomyces_avermitilis
Streptomyces_coelicolor
Sulfolobus_acidocaldarius_DSM_639
Sulfolobus_solfataricus
Sulfolobus_tokodaii
Symbiobacterium_thermophilum_IAM14863
Synechococcus_CC9311
Synechococcus_CC9605
Synechococcus_CC9902
Synechococcus_elongatus_PCC_6301
Synechococcus_elongatus_PCC_7942
Synechococcus_sp_WH8102
Synechocystis_PCC6803
Syntrophobacter_fumaroxidans_MPOB
Syntrophomonas_wolfei_Goettingen
Syntrophus_aciditrophicus_SB
Thermoanaerobacter_tengcongensis
Thermobifida_fusca_YX
Thermococcus_kodakaraensis_KOD1
Thermofilum_pendens_Hrk_5
Thermoplasma_acidophilum
Thermoplasma_volcanium
Thermosynechococcus_elongatus
Thermotoga_maritima
Thermus_thermophilus_HB27
Thermus_thermophilus_HB8
Thiobacillus_denitrificans_ATCC_25259
Thiomicrospira_crunogena_XCL-2
Thiomicrospira_denitrificans_ATCC_33889
Treponema_denticola_ATCC_35405
Treponema_pallidum
Trichodesmium_erythraeum_IMS101
Tropheryma_whipplei_TW08_27
Tropheryma_whipplei_Twist
Ureaplasma_urealyticum
Verminephrobacter_eiseniae_EF01-2
Vibrio_cholerae
Vibrio_fischeri_ES114
Vibrio_parahaemolyticus
Vibrio_vulnificus_CMCP6
Vibrio_vulnificus_YJ016
Wigglesworthia_brevipalpis
Wolbachia_endosymbiont_of_Brugia_malayi_TRS
Wolbachia_endosymbiont_of_Drosophila_melanogaster
Wolinella_succinogenes
Xanthomonas_campestris
Xanthomonas_campestris_8004
Xanthomonas_campestris_vesicatoria_85-10
Xanthomonas_citri
Xanthomonas_oryzae_KACC10331
Xanthomonas_oryzae_MAFF_311018
Xylella_fastidiosa
Xylella_fastidiosa_Temecula1
Yersinia_enterocolitica_8081
Yersinia_pestis_Antiqua
Yersinia_pestis_CO92
Yersinia_pestis_KIM
Yersinia_pestis_Nepal516
Yersinia_pestis_biovar_Mediaevails
Yersinia_pseudotuberculosis_IP32953
Zymomonas_mobilis_ZM4
refset based
genome based
Organism 2:
none
Acidobacteria_bacterium_Ellin345
Acidothermus_cellulolyticus_11B
Acidovorax_JS42
Acidovorax_avenae_citrulli_AAC00-1
Acinetobacter_baumannii_ATCC_17978
Acinetobacter_sp_ADP1
Actinobacillus_pleuropneumoniae_L20
Aeromonas_hydrophila_ATCC_7966
Aeropyrum_pernix
Agrobacterium_tumefaciens_C58_Cereon
Agrobacterium_tumefaciens_C58_UWash
Alcanivorax_borkumensis_SK2
Alkalilimnicola_ehrlichei_MLHE-1
Anabaena_variabilis_ATCC_29413
Anaeromyxobacter_dehalogenans_2CP-C
Anaplasma_marginale_St_Maries
Anaplasma_phagocytophilum_HZ
Aquifex_aeolicus
Archaeoglobus_fulgidus
Arthrobacter_FB24
Arthrobacter_aurescens_TC1
Aster_yellows_witches-broom_phytoplasma_AYWB
Azoarcus_BH72
Azoarcus_sp_EbN1
Bacillus_anthracis_Ames
Bacillus_anthracis_Ames_0581
Bacillus_anthracis_str_Sterne
Bacillus_cereus_ATCC14579
Bacillus_cereus_ATCC_10987
Bacillus_cereus_ZK
Bacillus_clausii_KSM-K16
Bacillus_halodurans
Bacillus_licheniformis_ATCC_14580
Bacillus_licheniformis_DSM_13
Bacillus_subtilis
Bacillus_thuringiensis_Al_Hakam
Bacillus_thuringiensis_konkukian
Bacteroides_fragilis_NCTC_9434
Bacteroides_fragilis_YCH46
Bacteroides_thetaiotaomicron_VPI-5482
Bartonella_bacilliformis_KC583
Bartonella_henselae_Houston-1
Bartonella_quintana_Toulouse
Baumannia_cicadellinicola_Homalodisca_coagulata
Bdellovibrio_bacteriovorus
Bifidobacterium_adolescentis_ATCC_15703
Bifidobacterium_longum
Bordetella_bronchiseptica
Bordetella_parapertussis
Bordetella_pertussis
Borrelia_afzelii_PKo
Borrelia_burgdorferi
Borrelia_garinii_PBi
Bradyrhizobium_japonicum
Brucella_abortus_9-941
Brucella_melitensis
Brucella_melitensis_biovar_Abortus
Brucella_suis_1330
Buchnera_aphidicola
Buchnera_aphidicola_Cc_Cinara_cedri
Buchnera_aphidicola_Sg
Buchnera_sp
Burkholderia_383
Burkholderia_cenocepacia_AU_1054
Burkholderia_cenocepacia_HI2424
Burkholderia_cepacia_AMMD
Burkholderia_mallei_ATCC_23344
Burkholderia_mallei_NCTC_10229
Burkholderia_mallei_NCTC_10247
Burkholderia_mallei_SAVP1
Burkholderia_pseudomallei_1106a
Burkholderia_pseudomallei_1710b
Burkholderia_pseudomallei_668
Burkholderia_pseudomallei_K96243
Burkholderia_thailandensis_E264
Burkholderia_xenovorans_LB400
Campylobacter_fetus_82-40
Campylobacter_jejuni
Campylobacter_jejuni_81-176
Campylobacter_jejuni_RM1221
Candidatus_Blochmannia_floridanus
Candidatus_Blochmannia_pennsylvanicus_BPEN
Candidatus_Carsonella_ruddii
Candidatus_Carsonella_ruddii_PV
Candidatus_Pelagibacter_ubique_HTCC1062
Candidatus_Ruthia_magnifica_Cm_Calyptogena_magnifica_
Carboxydothermus_hydrogenoformans_Z-2901
Caulobacter_crescentus
Chlamydia_muridarum
Chlamydia_trachomatis
Chlamydia_trachomatis_A_HAR-13
Chlamydophila_abortus_S26_3
Chlamydophila_caviae
Chlamydophila_felis_Fe_C-56
Chlamydophila_pneumoniae_AR39
Chlamydophila_pneumoniae_CWL029
Chlamydophila_pneumoniae_J138
Chlamydophila_pneumoniae_TW_183
Chlorobium_chlorochromatii_CaD3
Chlorobium_phaeobacteroides_DSM_266
Chlorobium_tepidum_TLS
Chromobacterium_violaceum
Chromohalobacter_salexigens_DSM_3043
Clostridium_acetobutylicum
Clostridium_difficile_630
Clostridium_novyi_NT
Clostridium_perfringens
Clostridium_perfringens_ATCC_13124
Clostridium_perfringens_SM101
Clostridium_tetani_E88
Clostridium_thermocellum_ATCC_27405
Colwellia_psychrerythraea_34H
Corynebacterium_diphtheriae
Corynebacterium_efficiens_YS-314
Corynebacterium_glutamicum_ATCC_13032_Bielefeld
Corynebacterium_glutamicum_ATCC_13032_Kitasato
Corynebacterium_jeikeium_K411
Coxiella_burnetii
Cyanobacteria_bacterium_Yellowstone_A-Prime
Cyanobacteria_bacterium_Yellowstone_B-Prime
Cytophaga_hutchinsonii_ATCC_33406
Dechloromonas_aromatica_RCB
Dehalococcoides_CBDB1
Dehalococcoides_ethenogenes_195
Deinococcus_geothermalis_DSM_11300
Deinococcus_radiodurans
Desulfitobacterium_hafniense_Y51
Desulfotalea_psychrophila_LSv54
Desulfovibrio_desulfuricans_G20
Desulfovibrio_vulgaris_DP4
Desulfovibrio_vulgaris_Hildenborough
Ehrlichia_canis_Jake
Ehrlichia_chaffeensis_Arkansas
Ehrlichia_ruminantium_Gardel
Ehrlichia_ruminantium_Welgevonden
Enterococcus_faecalis_V583
Erwinia_carotovora_atroseptica_SCRI1043
Erythrobacter_litoralis_HTCC2594
Escherichia_coli_536
Escherichia_coli_APEC_O1
Escherichia_coli_CFT073
Escherichia_coli_K12
Escherichia_coli_O157H7
Escherichia_coli_O157H7_EDL933
Escherichia_coli_UTI89
Escherichia_coli_W3110
Francisella_tularensis_FSC_198
Francisella_tularensis_holarctica
Francisella_tularensis_holarctica_OSU18
Francisella_tularensis_novicida_U112
Francisella_tularensis_tularensis
Frankia_CcI3
Frankia_alni_ACN14a
Fusobacterium_nucleatum
Geobacillus_kaustophilus_HTA426
Geobacter_metallireducens_GS-15
Geobacter_sulfurreducens
Gloeobacter_violaceus
Gluconobacter_oxydans_621H
Gramella_forsetii_KT0803
Granulobacter_bethesdensis_CGDNIH1
Haemophilus_ducreyi_35000HP
Haemophilus_influenzae
Haemophilus_influenzae_86_028NP
Haemophilus_somnus_129PT
Hahella_chejuensis_KCTC_2396
Haloarcula_marismortui_ATCC_43049
Halobacterium_sp
Haloquadratum_walsbyi
Halorhodospira_halophila_SL1
Helicobacter_acinonychis_Sheeba
Helicobacter_hepaticus
Helicobacter_pylori_26695
Helicobacter_pylori_HPAG1
Helicobacter_pylori_J99
Hyperthermus_butylicus
Hyphomonas_neptunium_ATCC_15444
Idiomarina_loihiensis_L2TR
Jannaschia_CCS1
Lactobacillus_acidophilus_NCFM
Lactobacillus_brevis_ATCC_367
Lactobacillus_casei_ATCC_334
Lactobacillus_delbrueckii_bulgaricus
Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365
Lactobacillus_gasseri_ATCC_33323
Lactobacillus_johnsonii_NCC_533
Lactobacillus_plantarum
Lactobacillus_sakei_23K
Lactobacillus_salivarius_UCC118
Lactococcus_lactis
Lactococcus_lactis_cremoris_MG1363
Lactococcus_lactis_cremoris_SK11
Lawsonia_intracellularis_PHE_MN1-00
Legionella_pneumophila_Lens
Legionella_pneumophila_Paris
Legionella_pneumophila_Philadelphia_1
Leifsonia_xyli_xyli_CTCB0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_JB197
Leptospira_borgpetersenii_serovar_Hardjo-bovis_L550
Leptospira_interrogans_serovar_Copenhageni
Leptospira_interrogans_serovar_Lai
Leuconostoc_mesenteroides_ATCC_8293
Listeria_innocua
Listeria_monocytogenes
Listeria_monocytogenes_4b_F2365
Listeria_welshimeri_serovar_6b_SLCC5334
Magnetococcus_MC-1
Magnetospirillum_magneticum_AMB-1
Mannheimia_succiniciproducens_MBEL55E
Maricaulis_maris_MCS10
Marinobacter_aquaeolei_VT8
Mesoplasma_florum_L1
Mesorhizobium_BNC1
Mesorhizobium_loti
Methanobacterium_thermoautotrophicum
Methanococcoides_burtonii_DSM_6242
Methanococcus_jannaschii
Methanococcus_maripaludis_S2
Methanocorpusculum_labreanum_Z
Methanoculleus_marisnigri_JR1
Methanopyrus_kandleri
Methanosaeta_thermophila_PT
Methanosarcina_acetivorans
Methanosarcina_barkeri_fusaro
Methanosarcina_mazei
Methanosphaera_stadtmanae
Methanospirillum_hungatei_JF-1
Methylibium_petroleiphilum_PM1
Methylobacillus_flagellatus_KT
Methylococcus_capsulatus_Bath
Moorella_thermoacetica_ATCC_39073
Mycobacterium_JLS
Mycobacterium_KMS
Mycobacterium_MCS
Mycobacterium_avium_104
Mycobacterium_avium_paratuberculosis
Mycobacterium_bovis
Mycobacterium_bovis_BCG_Pasteur_1173P2
Mycobacterium_leprae
Mycobacterium_smegmatis_MC2_155
Mycobacterium_tuberculosis_CDC1551
Mycobacterium_tuberculosis_H37Rv
Mycobacterium_ulcerans_Agy99
Mycobacterium_vanbaalenii_PYR-1
Mycoplasma_capricolum_ATCC_27343
Mycoplasma_gallisepticum
Mycoplasma_genitalium
Mycoplasma_hyopneumoniae_232
Mycoplasma_hyopneumoniae_7448
Mycoplasma_hyopneumoniae_J
Mycoplasma_mobile_163K
Mycoplasma_mycoides
Mycoplasma_penetrans
Mycoplasma_pneumoniae
Mycoplasma_pulmonis
Mycoplasma_synoviae_53
Myxococcus_xanthus_DK_1622
Nanoarchaeum_equitans
Natronomonas_pharaonis
Neisseria_gonorrhoeae_FA_1090
Neisseria_meningitidis_FAM18
Neisseria_meningitidis_MC58
Neisseria_meningitidis_Z2491
Neorickettsia_sennetsu_Miyayama
Nitrobacter_hamburgensis_X14
Nitrobacter_winogradskyi_Nb-255
Nitrosococcus_oceani_ATCC_19707
Nitrosomonas_europaea
Nitrosomonas_eutropha_C71
Nitrosospira_multiformis_ATCC_25196
Nocardia_farcinica_IFM10152
Nocardioides_JS614
Nostoc_sp
Novosphingobium_aromaticivorans_DSM_12444
Oceanobacillus_iheyensis
Oenococcus_oeni_PSU-1
Onion_yellows_phytoplasma
Parachlamydia_sp_UWE25
Paracoccus_denitrificans_PD1222
Pasteurella_multocida
Pediococcus_pentosaceus_ATCC_25745
Pelobacter_carbinolicus
Pelobacter_propionicus_DSM_2379
Pelodictyon_luteolum_DSM_273
Photobacterium_profundum_SS9
Photorhabdus_luminescens
Picrophilus_torridus_DSM_9790
Pirellula_sp
Polaromonas_JS666
Polaromonas_naphthalenivorans_CJ2
Porphyromonas_gingivalis_W83
Prochlorococcus_marinus_AS9601
Prochlorococcus_marinus_CCMP1375
Prochlorococcus_marinus_MED4
Prochlorococcus_marinus_MIT9313
Prochlorococcus_marinus_MIT_9301
Prochlorococcus_marinus_MIT_9303
Prochlorococcus_marinus_MIT_9312
Prochlorococcus_marinus_MIT_9515
Prochlorococcus_marinus_NATL1A
Prochlorococcus_marinus_NATL2A
Propionibacterium_acnes_KPA171202
Pseudoalteromonas_atlantica_T6c
Pseudoalteromonas_haloplanktis_TAC125
Pseudomonas_aeruginosa
Pseudomonas_aeruginosa_UCBPP-PA14
Pseudomonas_entomophila_L48
Pseudomonas_fluorescens_Pf-5
Pseudomonas_fluorescens_PfO-1
Pseudomonas_putida_KT2440
Pseudomonas_syringae_phaseolicola_1448A
Pseudomonas_syringae_pv_B728a
Pseudomonas_syringae_tomato_DC3000
Psychrobacter_arcticum_273-4
Psychrobacter_cryohalolentis_K5
Psychromonas_ingrahamii_37
Pyrobaculum_aerophilum
Pyrobaculum_calidifontis_JCM_11548
Pyrobaculum_islandicum_DSM_4184
Pyrococcus_abyssi
Pyrococcus_furiosus
Pyrococcus_horikoshii
Ralstonia_eutropha_H16
Ralstonia_eutropha_JMP134
Ralstonia_metallidurans_CH34
Ralstonia_solanacearum
Rhizobium_etli_CFN_42
Rhizobium_leguminosarum_bv_viciae_3841
Rhodobacter_sphaeroides_2_4_1
Rhodobacter_sphaeroides_ATCC_17029
Rhodococcus_RHA1
Rhodoferax_ferrireducens_T118
Rhodopseudomonas_palustris_BisA53
Rhodopseudomonas_palustris_BisB18
Rhodopseudomonas_palustris_BisB5
Rhodopseudomonas_palustris_CGA009
Rhodopseudomonas_palustris_HaA2
Rhodospirillum_rubrum_ATCC_11170
Rickettsia_bellii_RML369-C
Rickettsia_conorii
Rickettsia_felis_URRWXCal2
Rickettsia_prowazekii
Rickettsia_typhi_wilmington
Roseobacter_denitrificans_OCh_114
Rubrobacter_xylanophilus_DSM_9941
Saccharophagus_degradans_2-40
Salinibacter_ruber_DSM_13855
Salmonella_enterica_Choleraesuis
Salmonella_enterica_Paratypi_ATCC_9150
Salmonella_typhi
Salmonella_typhi_Ty2
Salmonella_typhimurium_LT2
Shewanella_ANA-3
Shewanella_MR-4
Shewanella_MR-7
Shewanella_W3-18-1
Shewanella_amazonensis_SB2B
Shewanella_baltica_OS155
Shewanella_denitrificans_OS217
Shewanella_frigidimarina_NCIMB_400
Shewanella_loihica_PV-4
Shewanella_oneidensis
Shigella_boydii_Sb227
Shigella_dysenteriae
Shigella_flexneri_2a
Shigella_flexneri_2a_2457T
Shigella_flexneri_5_8401
Shigella_sonnei_Ss046
Silicibacter_TM1040
Silicibacter_pomeroyi_DSS-3
Sinorhizobium_meliloti
Sodalis_glossinidius_morsitans
Solibacter_usitatus_Ellin6076
Sphingopyxis_alaskensis_RB2256
Staphylococcus_aureus_COL
Staphylococcus_aureus_MW2
Staphylococcus_aureus_Mu50
Staphylococcus_aureus_N315
Staphylococcus_aureus_NCTC_8325
Staphylococcus_aureus_RF122
Staphylococcus_aureus_USA300
Staphylococcus_aureus_aureus_MRSA252
Staphylococcus_aureus_aureus_MSSA476
Staphylococcus_epidermidis_ATCC_12228
Staphylococcus_epidermidis_RP62A
Staphylococcus_haemolyticus
Staphylococcus_saprophyticus
Staphylothermus_marinus_F1
Streptococcus_agalactiae_2603
Streptococcus_agalactiae_A909
Streptococcus_agalactiae_NEM316
Streptococcus_mutans
Streptococcus_pneumoniae_D39
Streptococcus_pneumoniae_R6
Streptococcus_pneumoniae_TIGR4
Streptococcus_pyogenes_M1_GAS
Streptococcus_pyogenes_MGAS10270
Streptococcus_pyogenes_MGAS10394
Streptococcus_pyogenes_MGAS10750
Streptococcus_pyogenes_MGAS2096
Streptococcus_pyogenes_MGAS315
Streptococcus_pyogenes_MGAS5005
Streptococcus_pyogenes_MGAS6180
Streptococcus_pyogenes_MGAS8232
Streptococcus_pyogenes_MGAS9429
Streptococcus_pyogenes_SSI-1
Streptococcus_sanguinis_SK36
Streptococcus_thermophilus_CNRZ1066
Streptococcus_thermophilus_LMD-9
Streptococcus_thermophilus_LMG_18311
Streptomyces_avermitilis
Streptomyces_coelicolor
Sulfolobus_acidocaldarius_DSM_639
Sulfolobus_solfataricus
Sulfolobus_tokodaii
Symbiobacterium_thermophilum_IAM14863
Synechococcus_CC9311
Synechococcus_CC9605
Synechococcus_CC9902
Synechococcus_elongatus_PCC_6301
Synechococcus_elongatus_PCC_7942
Synechococcus_sp_WH8102
Synechocystis_PCC6803
Syntrophobacter_fumaroxidans_MPOB
Syntrophomonas_wolfei_Goettingen
Syntrophus_aciditrophicus_SB
Thermoanaerobacter_tengcongensis
Thermobifida_fusca_YX
Thermococcus_kodakaraensis_KOD1
Thermofilum_pendens_Hrk_5
Thermoplasma_acidophilum
Thermoplasma_volcanium
Thermosynechococcus_elongatus
Thermotoga_maritima
Thermus_thermophilus_HB27
Thermus_thermophilus_HB8
Thiobacillus_denitrificans_ATCC_25259
Thiomicrospira_crunogena_XCL-2
Thiomicrospira_denitrificans_ATCC_33889
Treponema_denticola_ATCC_35405
Treponema_pallidum
Trichodesmium_erythraeum_IMS101
Tropheryma_whipplei_TW08_27
Tropheryma_whipplei_Twist
Ureaplasma_urealyticum
Verminephrobacter_eiseniae_EF01-2
Vibrio_cholerae
Vibrio_fischeri_ES114
Vibrio_parahaemolyticus
Vibrio_vulnificus_CMCP6
Vibrio_vulnificus_YJ016
Wigglesworthia_brevipalpis
Wolbachia_endosymbiont_of_Brugia_malayi_TRS
Wolbachia_endosymbiont_of_Drosophila_melanogaster
Wolinella_succinogenes
Xanthomonas_campestris
Xanthomonas_campestris_8004
Xanthomonas_campestris_vesicatoria_85-10
Xanthomonas_citri
Xanthomonas_oryzae_KACC10331
Xanthomonas_oryzae_MAFF_311018
Xylella_fastidiosa
Xylella_fastidiosa_Temecula1
Yersinia_enterocolitica_8081
Yersinia_pestis_Antiqua
Yersinia_pestis_CO92
Yersinia_pestis_KIM
Yersinia_pestis_Nepal516
Yersinia_pestis_biovar_Mediaevails
Yersinia_pseudotuberculosis_IP32953
Zymomonas_mobilis_ZM4
refset based
genome based
Organism 3:
none
Acidobacteria_bacterium_Ellin345
Acidothermus_cellulolyticus_11B
Acidovorax_JS42
Acidovorax_avenae_citrulli_AAC00-1
Acinetobacter_baumannii_ATCC_17978
Acinetobacter_sp_ADP1
Actinobacillus_pleuropneumoniae_L20
Aeromonas_hydrophila_ATCC_7966
Aeropyrum_pernix
Agrobacterium_tumefaciens_C58_Cereon
Agrobacterium_tumefaciens_C58_UWash
Alcanivorax_borkumensis_SK2
Alkalilimnicola_ehrlichei_MLHE-1
Anabaena_variabilis_ATCC_29413
Anaeromyxobacter_dehalogenans_2CP-C
Anaplasma_marginale_St_Maries
Anaplasma_phagocytophilum_HZ
Aquifex_aeolicus
Archaeoglobus_fulgidus
Arthrobacter_FB24
Arthrobacter_aurescens_TC1
Aster_yellows_witches-broom_phytoplasma_AYWB
Azoarcus_BH72
Azoarcus_sp_EbN1
Bacillus_anthracis_Ames
Bacillus_anthracis_Ames_0581
Bacillus_anthracis_str_Sterne
Bacillus_cereus_ATCC14579
Bacillus_cereus_ATCC_10987
Bacillus_cereus_ZK
Bacillus_clausii_KSM-K16
Bacillus_halodurans
Bacillus_licheniformis_ATCC_14580
Bacillus_licheniformis_DSM_13
Bacillus_subtilis
Bacillus_thuringiensis_Al_Hakam
Bacillus_thuringiensis_konkukian
Bacteroides_fragilis_NCTC_9434
Bacteroides_fragilis_YCH46
Bacteroides_thetaiotaomicron_VPI-5482
Bartonella_bacilliformis_KC583
Bartonella_henselae_Houston-1
Bartonella_quintana_Toulouse
Baumannia_cicadellinicola_Homalodisca_coagulata
Bdellovibrio_bacteriovorus
Bifidobacterium_adolescentis_ATCC_15703
Bifidobacterium_longum
Bordetella_bronchiseptica
Bordetella_parapertussis
Bordetella_pertussis
Borrelia_afzelii_PKo
Borrelia_burgdorferi
Borrelia_garinii_PBi
Bradyrhizobium_japonicum
Brucella_abortus_9-941
Brucella_melitensis
Brucella_melitensis_biovar_Abortus
Brucella_suis_1330
Buchnera_aphidicola
Buchnera_aphidicola_Cc_Cinara_cedri
Buchnera_aphidicola_Sg
Buchnera_sp
Burkholderia_383
Burkholderia_cenocepacia_AU_1054
Burkholderia_cenocepacia_HI2424
Burkholderia_cepacia_AMMD
Burkholderia_mallei_ATCC_23344
Burkholderia_mallei_NCTC_10229
Burkholderia_mallei_NCTC_10247
Burkholderia_mallei_SAVP1
Burkholderia_pseudomallei_1106a
Burkholderia_pseudomallei_1710b
Burkholderia_pseudomallei_668
Burkholderia_pseudomallei_K96243
Burkholderia_thailandensis_E264
Burkholderia_xenovorans_LB400
Campylobacter_fetus_82-40
Campylobacter_jejuni
Campylobacter_jejuni_81-176
Campylobacter_jejuni_RM1221
Candidatus_Blochmannia_floridanus
Candidatus_Blochmannia_pennsylvanicus_BPEN
Candidatus_Carsonella_ruddii
Candidatus_Carsonella_ruddii_PV
Candidatus_Pelagibacter_ubique_HTCC1062
Candidatus_Ruthia_magnifica_Cm_Calyptogena_magnifica_
Carboxydothermus_hydrogenoformans_Z-2901
Caulobacter_crescentus
Chlamydia_muridarum
Chlamydia_trachomatis
Chlamydia_trachomatis_A_HAR-13
Chlamydophila_abortus_S26_3
Chlamydophila_caviae
Chlamydophila_felis_Fe_C-56
Chlamydophila_pneumoniae_AR39
Chlamydophila_pneumoniae_CWL029
Chlamydophila_pneumoniae_J138
Chlamydophila_pneumoniae_TW_183
Chlorobium_chlorochromatii_CaD3
Chlorobium_phaeobacteroides_DSM_266
Chlorobium_tepidum_TLS
Chromobacterium_violaceum
Chromohalobacter_salexigens_DSM_3043
Clostridium_acetobutylicum
Clostridium_difficile_630
Clostridium_novyi_NT
Clostridium_perfringens
Clostridium_perfringens_ATCC_13124
Clostridium_perfringens_SM101
Clostridium_tetani_E88
Clostridium_thermocellum_ATCC_27405
Colwellia_psychrerythraea_34H
Corynebacterium_diphtheriae
Corynebacterium_efficiens_YS-314
Corynebacterium_glutamicum_ATCC_13032_Bielefeld
Corynebacterium_glutamicum_ATCC_13032_Kitasato
Corynebacterium_jeikeium_K411
Coxiella_burnetii
Cyanobacteria_bacterium_Yellowstone_A-Prime
Cyanobacteria_bacterium_Yellowstone_B-Prime
Cytophaga_hutchinsonii_ATCC_33406
Dechloromonas_aromatica_RCB
Dehalococcoides_CBDB1
Dehalococcoides_ethenogenes_195
Deinococcus_geothermalis_DSM_11300
Deinococcus_radiodurans
Desulfitobacterium_hafniense_Y51
Desulfotalea_psychrophila_LSv54
Desulfovibrio_desulfuricans_G20
Desulfovibrio_vulgaris_DP4
Desulfovibrio_vulgaris_Hildenborough
Ehrlichia_canis_Jake
Ehrlichia_chaffeensis_Arkansas
Ehrlichia_ruminantium_Gardel
Ehrlichia_ruminantium_Welgevonden
Enterococcus_faecalis_V583
Erwinia_carotovora_atroseptica_SCRI1043
Erythrobacter_litoralis_HTCC2594
Escherichia_coli_536
Escherichia_coli_APEC_O1
Escherichia_coli_CFT073
Escherichia_coli_K12
Escherichia_coli_O157H7
Escherichia_coli_O157H7_EDL933
Escherichia_coli_UTI89
Escherichia_coli_W3110
Francisella_tularensis_FSC_198
Francisella_tularensis_holarctica
Francisella_tularensis_holarctica_OSU18
Francisella_tularensis_novicida_U112
Francisella_tularensis_tularensis
Frankia_CcI3
Frankia_alni_ACN14a
Fusobacterium_nucleatum
Geobacillus_kaustophilus_HTA426
Geobacter_metallireducens_GS-15
Geobacter_sulfurreducens
Gloeobacter_violaceus
Gluconobacter_oxydans_621H
Gramella_forsetii_KT0803
Granulobacter_bethesdensis_CGDNIH1
Haemophilus_ducreyi_35000HP
Haemophilus_influenzae
Haemophilus_influenzae_86_028NP
Haemophilus_somnus_129PT
Hahella_chejuensis_KCTC_2396
Haloarcula_marismortui_ATCC_43049
Halobacterium_sp
Haloquadratum_walsbyi
Halorhodospira_halophila_SL1
Helicobacter_acinonychis_Sheeba
Helicobacter_hepaticus
Helicobacter_pylori_26695
Helicobacter_pylori_HPAG1
Helicobacter_pylori_J99
Hyperthermus_butylicus
Hyphomonas_neptunium_ATCC_15444
Idiomarina_loihiensis_L2TR
Jannaschia_CCS1
Lactobacillus_acidophilus_NCFM
Lactobacillus_brevis_ATCC_367
Lactobacillus_casei_ATCC_334
Lactobacillus_delbrueckii_bulgaricus
Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365
Lactobacillus_gasseri_ATCC_33323
Lactobacillus_johnsonii_NCC_533
Lactobacillus_plantarum
Lactobacillus_sakei_23K
Lactobacillus_salivarius_UCC118
Lactococcus_lactis
Lactococcus_lactis_cremoris_MG1363
Lactococcus_lactis_cremoris_SK11
Lawsonia_intracellularis_PHE_MN1-00
Legionella_pneumophila_Lens
Legionella_pneumophila_Paris
Legionella_pneumophila_Philadelphia_1
Leifsonia_xyli_xyli_CTCB0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_JB197
Leptospira_borgpetersenii_serovar_Hardjo-bovis_L550
Leptospira_interrogans_serovar_Copenhageni
Leptospira_interrogans_serovar_Lai
Leuconostoc_mesenteroides_ATCC_8293
Listeria_innocua
Listeria_monocytogenes
Listeria_monocytogenes_4b_F2365
Listeria_welshimeri_serovar_6b_SLCC5334
Magnetococcus_MC-1
Magnetospirillum_magneticum_AMB-1
Mannheimia_succiniciproducens_MBEL55E
Maricaulis_maris_MCS10
Marinobacter_aquaeolei_VT8
Mesoplasma_florum_L1
Mesorhizobium_BNC1
Mesorhizobium_loti
Methanobacterium_thermoautotrophicum
Methanococcoides_burtonii_DSM_6242
Methanococcus_jannaschii
Methanococcus_maripaludis_S2
Methanocorpusculum_labreanum_Z
Methanoculleus_marisnigri_JR1
Methanopyrus_kandleri
Methanosaeta_thermophila_PT
Methanosarcina_acetivorans
Methanosarcina_barkeri_fusaro
Methanosarcina_mazei
Methanosphaera_stadtmanae
Methanospirillum_hungatei_JF-1
Methylibium_petroleiphilum_PM1
Methylobacillus_flagellatus_KT
Methylococcus_capsulatus_Bath
Moorella_thermoacetica_ATCC_39073
Mycobacterium_JLS
Mycobacterium_KMS
Mycobacterium_MCS
Mycobacterium_avium_104
Mycobacterium_avium_paratuberculosis
Mycobacterium_bovis
Mycobacterium_bovis_BCG_Pasteur_1173P2
Mycobacterium_leprae
Mycobacterium_smegmatis_MC2_155
Mycobacterium_tuberculosis_CDC1551
Mycobacterium_tuberculosis_H37Rv
Mycobacterium_ulcerans_Agy99
Mycobacterium_vanbaalenii_PYR-1
Mycoplasma_capricolum_ATCC_27343
Mycoplasma_gallisepticum
Mycoplasma_genitalium
Mycoplasma_hyopneumoniae_232
Mycoplasma_hyopneumoniae_7448
Mycoplasma_hyopneumoniae_J
Mycoplasma_mobile_163K
Mycoplasma_mycoides
Mycoplasma_penetrans
Mycoplasma_pneumoniae
Mycoplasma_pulmonis
Mycoplasma_synoviae_53
Myxococcus_xanthus_DK_1622
Nanoarchaeum_equitans
Natronomonas_pharaonis
Neisseria_gonorrhoeae_FA_1090
Neisseria_meningitidis_FAM18
Neisseria_meningitidis_MC58
Neisseria_meningitidis_Z2491
Neorickettsia_sennetsu_Miyayama
Nitrobacter_hamburgensis_X14
Nitrobacter_winogradskyi_Nb-255
Nitrosococcus_oceani_ATCC_19707
Nitrosomonas_europaea
Nitrosomonas_eutropha_C71
Nitrosospira_multiformis_ATCC_25196
Nocardia_farcinica_IFM10152
Nocardioides_JS614
Nostoc_sp
Novosphingobium_aromaticivorans_DSM_12444
Oceanobacillus_iheyensis
Oenococcus_oeni_PSU-1
Onion_yellows_phytoplasma
Parachlamydia_sp_UWE25
Paracoccus_denitrificans_PD1222
Pasteurella_multocida
Pediococcus_pentosaceus_ATCC_25745
Pelobacter_carbinolicus
Pelobacter_propionicus_DSM_2379
Pelodictyon_luteolum_DSM_273
Photobacterium_profundum_SS9
Photorhabdus_luminescens
Picrophilus_torridus_DSM_9790
Pirellula_sp
Polaromonas_JS666
Polaromonas_naphthalenivorans_CJ2
Porphyromonas_gingivalis_W83
Prochlorococcus_marinus_AS9601
Prochlorococcus_marinus_CCMP1375
Prochlorococcus_marinus_MED4
Prochlorococcus_marinus_MIT9313
Prochlorococcus_marinus_MIT_9301
Prochlorococcus_marinus_MIT_9303
Prochlorococcus_marinus_MIT_9312
Prochlorococcus_marinus_MIT_9515
Prochlorococcus_marinus_NATL1A
Prochlorococcus_marinus_NATL2A
Propionibacterium_acnes_KPA171202
Pseudoalteromonas_atlantica_T6c
Pseudoalteromonas_haloplanktis_TAC125
Pseudomonas_aeruginosa
Pseudomonas_aeruginosa_UCBPP-PA14
Pseudomonas_entomophila_L48
Pseudomonas_fluorescens_Pf-5
Pseudomonas_fluorescens_PfO-1
Pseudomonas_putida_KT2440
Pseudomonas_syringae_phaseolicola_1448A
Pseudomonas_syringae_pv_B728a
Pseudomonas_syringae_tomato_DC3000
Psychrobacter_arcticum_273-4
Psychrobacter_cryohalolentis_K5
Psychromonas_ingrahamii_37
Pyrobaculum_aerophilum
Pyrobaculum_calidifontis_JCM_11548
Pyrobaculum_islandicum_DSM_4184
Pyrococcus_abyssi
Pyrococcus_furiosus
Pyrococcus_horikoshii
Ralstonia_eutropha_H16
Ralstonia_eutropha_JMP134
Ralstonia_metallidurans_CH34
Ralstonia_solanacearum
Rhizobium_etli_CFN_42
Rhizobium_leguminosarum_bv_viciae_3841
Rhodobacter_sphaeroides_2_4_1
Rhodobacter_sphaeroides_ATCC_17029
Rhodococcus_RHA1
Rhodoferax_ferrireducens_T118
Rhodopseudomonas_palustris_BisA53
Rhodopseudomonas_palustris_BisB18
Rhodopseudomonas_palustris_BisB5
Rhodopseudomonas_palustris_CGA009
Rhodopseudomonas_palustris_HaA2
Rhodospirillum_rubrum_ATCC_11170
Rickettsia_bellii_RML369-C
Rickettsia_conorii
Rickettsia_felis_URRWXCal2
Rickettsia_prowazekii
Rickettsia_typhi_wilmington
Roseobacter_denitrificans_OCh_114
Rubrobacter_xylanophilus_DSM_9941
Saccharophagus_degradans_2-40
Salinibacter_ruber_DSM_13855
Salmonella_enterica_Choleraesuis
Salmonella_enterica_Paratypi_ATCC_9150
Salmonella_typhi
Salmonella_typhi_Ty2
Salmonella_typhimurium_LT2
Shewanella_ANA-3
Shewanella_MR-4
Shewanella_MR-7
Shewanella_W3-18-1
Shewanella_amazonensis_SB2B
Shewanella_baltica_OS155
Shewanella_denitrificans_OS217
Shewanella_frigidimarina_NCIMB_400
Shewanella_loihica_PV-4
Shewanella_oneidensis
Shigella_boydii_Sb227
Shigella_dysenteriae
Shigella_flexneri_2a
Shigella_flexneri_2a_2457T
Shigella_flexneri_5_8401
Shigella_sonnei_Ss046
Silicibacter_TM1040
Silicibacter_pomeroyi_DSS-3
Sinorhizobium_meliloti
Sodalis_glossinidius_morsitans
Solibacter_usitatus_Ellin6076
Sphingopyxis_alaskensis_RB2256
Staphylococcus_aureus_COL
Staphylococcus_aureus_MW2
Staphylococcus_aureus_Mu50
Staphylococcus_aureus_N315
Staphylococcus_aureus_NCTC_8325
Staphylococcus_aureus_RF122
Staphylococcus_aureus_USA300
Staphylococcus_aureus_aureus_MRSA252
Staphylococcus_aureus_aureus_MSSA476
Staphylococcus_epidermidis_ATCC_12228
Staphylococcus_epidermidis_RP62A
Staphylococcus_haemolyticus
Staphylococcus_saprophyticus
Staphylothermus_marinus_F1
Streptococcus_agalactiae_2603
Streptococcus_agalactiae_A909
Streptococcus_agalactiae_NEM316
Streptococcus_mutans
Streptococcus_pneumoniae_D39
Streptococcus_pneumoniae_R6
Streptococcus_pneumoniae_TIGR4
Streptococcus_pyogenes_M1_GAS
Streptococcus_pyogenes_MGAS10270
Streptococcus_pyogenes_MGAS10394
Streptococcus_pyogenes_MGAS10750
Streptococcus_pyogenes_MGAS2096
Streptococcus_pyogenes_MGAS315
Streptococcus_pyogenes_MGAS5005
Streptococcus_pyogenes_MGAS6180
Streptococcus_pyogenes_MGAS8232
Streptococcus_pyogenes_MGAS9429
Streptococcus_pyogenes_SSI-1
Streptococcus_sanguinis_SK36
Streptococcus_thermophilus_CNRZ1066
Streptococcus_thermophilus_LMD-9
Streptococcus_thermophilus_LMG_18311
Streptomyces_avermitilis
Streptomyces_coelicolor
Sulfolobus_acidocaldarius_DSM_639
Sulfolobus_solfataricus
Sulfolobus_tokodaii
Symbiobacterium_thermophilum_IAM14863
Synechococcus_CC9311
Synechococcus_CC9605
Synechococcus_CC9902
Synechococcus_elongatus_PCC_6301
Synechococcus_elongatus_PCC_7942
Synechococcus_sp_WH8102
Synechocystis_PCC6803
Syntrophobacter_fumaroxidans_MPOB
Syntrophomonas_wolfei_Goettingen
Syntrophus_aciditrophicus_SB
Thermoanaerobacter_tengcongensis
Thermobifida_fusca_YX
Thermococcus_kodakaraensis_KOD1
Thermofilum_pendens_Hrk_5
Thermoplasma_acidophilum
Thermoplasma_volcanium
Thermosynechococcus_elongatus
Thermotoga_maritima
Thermus_thermophilus_HB27
Thermus_thermophilus_HB8
Thiobacillus_denitrificans_ATCC_25259
Thiomicrospira_crunogena_XCL-2
Thiomicrospira_denitrificans_ATCC_33889
Treponema_denticola_ATCC_35405
Treponema_pallidum
Trichodesmium_erythraeum_IMS101
Tropheryma_whipplei_TW08_27
Tropheryma_whipplei_Twist
Ureaplasma_urealyticum
Verminephrobacter_eiseniae_EF01-2
Vibrio_cholerae
Vibrio_fischeri_ES114
Vibrio_parahaemolyticus
Vibrio_vulnificus_CMCP6
Vibrio_vulnificus_YJ016
Wigglesworthia_brevipalpis
Wolbachia_endosymbiont_of_Brugia_malayi_TRS
Wolbachia_endosymbiont_of_Drosophila_melanogaster
Wolinella_succinogenes
Xanthomonas_campestris
Xanthomonas_campestris_8004
Xanthomonas_campestris_vesicatoria_85-10
Xanthomonas_citri
Xanthomonas_oryzae_KACC10331
Xanthomonas_oryzae_MAFF_311018
Xylella_fastidiosa
Xylella_fastidiosa_Temecula1
Yersinia_enterocolitica_8081
Yersinia_pestis_Antiqua
Yersinia_pestis_CO92
Yersinia_pestis_KIM
Yersinia_pestis_Nepal516
Yersinia_pestis_biovar_Mediaevails
Yersinia_pseudotuberculosis_IP32953
Zymomonas_mobilis_ZM4
refset based
genome based
Organism 4:
none
Acidobacteria_bacterium_Ellin345
Acidothermus_cellulolyticus_11B
Acidovorax_JS42
Acidovorax_avenae_citrulli_AAC00-1
Acinetobacter_baumannii_ATCC_17978
Acinetobacter_sp_ADP1
Actinobacillus_pleuropneumoniae_L20
Aeromonas_hydrophila_ATCC_7966
Aeropyrum_pernix
Agrobacterium_tumefaciens_C58_Cereon
Agrobacterium_tumefaciens_C58_UWash
Alcanivorax_borkumensis_SK2
Alkalilimnicola_ehrlichei_MLHE-1
Anabaena_variabilis_ATCC_29413
Anaeromyxobacter_dehalogenans_2CP-C
Anaplasma_marginale_St_Maries
Anaplasma_phagocytophilum_HZ
Aquifex_aeolicus
Archaeoglobus_fulgidus
Arthrobacter_FB24
Arthrobacter_aurescens_TC1
Aster_yellows_witches-broom_phytoplasma_AYWB
Azoarcus_BH72
Azoarcus_sp_EbN1
Bacillus_anthracis_Ames
Bacillus_anthracis_Ames_0581
Bacillus_anthracis_str_Sterne
Bacillus_cereus_ATCC14579
Bacillus_cereus_ATCC_10987
Bacillus_cereus_ZK
Bacillus_clausii_KSM-K16
Bacillus_halodurans
Bacillus_licheniformis_ATCC_14580
Bacillus_licheniformis_DSM_13
Bacillus_subtilis
Bacillus_thuringiensis_Al_Hakam
Bacillus_thuringiensis_konkukian
Bacteroides_fragilis_NCTC_9434
Bacteroides_fragilis_YCH46
Bacteroides_thetaiotaomicron_VPI-5482
Bartonella_bacilliformis_KC583
Bartonella_henselae_Houston-1
Bartonella_quintana_Toulouse
Baumannia_cicadellinicola_Homalodisca_coagulata
Bdellovibrio_bacteriovorus
Bifidobacterium_adolescentis_ATCC_15703
Bifidobacterium_longum
Bordetella_bronchiseptica
Bordetella_parapertussis
Bordetella_pertussis
Borrelia_afzelii_PKo
Borrelia_burgdorferi
Borrelia_garinii_PBi
Bradyrhizobium_japonicum
Brucella_abortus_9-941
Brucella_melitensis
Brucella_melitensis_biovar_Abortus
Brucella_suis_1330
Buchnera_aphidicola
Buchnera_aphidicola_Cc_Cinara_cedri
Buchnera_aphidicola_Sg
Buchnera_sp
Burkholderia_383
Burkholderia_cenocepacia_AU_1054
Burkholderia_cenocepacia_HI2424
Burkholderia_cepacia_AMMD
Burkholderia_mallei_ATCC_23344
Burkholderia_mallei_NCTC_10229
Burkholderia_mallei_NCTC_10247
Burkholderia_mallei_SAVP1
Burkholderia_pseudomallei_1106a
Burkholderia_pseudomallei_1710b
Burkholderia_pseudomallei_668
Burkholderia_pseudomallei_K96243
Burkholderia_thailandensis_E264
Burkholderia_xenovorans_LB400
Campylobacter_fetus_82-40
Campylobacter_jejuni
Campylobacter_jejuni_81-176
Campylobacter_jejuni_RM1221
Candidatus_Blochmannia_floridanus
Candidatus_Blochmannia_pennsylvanicus_BPEN
Candidatus_Carsonella_ruddii
Candidatus_Carsonella_ruddii_PV
Candidatus_Pelagibacter_ubique_HTCC1062
Candidatus_Ruthia_magnifica_Cm_Calyptogena_magnifica_
Carboxydothermus_hydrogenoformans_Z-2901
Caulobacter_crescentus
Chlamydia_muridarum
Chlamydia_trachomatis
Chlamydia_trachomatis_A_HAR-13
Chlamydophila_abortus_S26_3
Chlamydophila_caviae
Chlamydophila_felis_Fe_C-56
Chlamydophila_pneumoniae_AR39
Chlamydophila_pneumoniae_CWL029
Chlamydophila_pneumoniae_J138
Chlamydophila_pneumoniae_TW_183
Chlorobium_chlorochromatii_CaD3
Chlorobium_phaeobacteroides_DSM_266
Chlorobium_tepidum_TLS
Chromobacterium_violaceum
Chromohalobacter_salexigens_DSM_3043
Clostridium_acetobutylicum
Clostridium_difficile_630
Clostridium_novyi_NT
Clostridium_perfringens
Clostridium_perfringens_ATCC_13124
Clostridium_perfringens_SM101
Clostridium_tetani_E88
Clostridium_thermocellum_ATCC_27405
Colwellia_psychrerythraea_34H
Corynebacterium_diphtheriae
Corynebacterium_efficiens_YS-314
Corynebacterium_glutamicum_ATCC_13032_Bielefeld
Corynebacterium_glutamicum_ATCC_13032_Kitasato
Corynebacterium_jeikeium_K411
Coxiella_burnetii
Cyanobacteria_bacterium_Yellowstone_A-Prime
Cyanobacteria_bacterium_Yellowstone_B-Prime
Cytophaga_hutchinsonii_ATCC_33406
Dechloromonas_aromatica_RCB
Dehalococcoides_CBDB1
Dehalococcoides_ethenogenes_195
Deinococcus_geothermalis_DSM_11300
Deinococcus_radiodurans
Desulfitobacterium_hafniense_Y51
Desulfotalea_psychrophila_LSv54
Desulfovibrio_desulfuricans_G20
Desulfovibrio_vulgaris_DP4
Desulfovibrio_vulgaris_Hildenborough
Ehrlichia_canis_Jake
Ehrlichia_chaffeensis_Arkansas
Ehrlichia_ruminantium_Gardel
Ehrlichia_ruminantium_Welgevonden
Enterococcus_faecalis_V583
Erwinia_carotovora_atroseptica_SCRI1043
Erythrobacter_litoralis_HTCC2594
Escherichia_coli_536
Escherichia_coli_APEC_O1
Escherichia_coli_CFT073
Escherichia_coli_K12
Escherichia_coli_O157H7
Escherichia_coli_O157H7_EDL933
Escherichia_coli_UTI89
Escherichia_coli_W3110
Francisella_tularensis_FSC_198
Francisella_tularensis_holarctica
Francisella_tularensis_holarctica_OSU18
Francisella_tularensis_novicida_U112
Francisella_tularensis_tularensis
Frankia_CcI3
Frankia_alni_ACN14a
Fusobacterium_nucleatum
Geobacillus_kaustophilus_HTA426
Geobacter_metallireducens_GS-15
Geobacter_sulfurreducens
Gloeobacter_violaceus
Gluconobacter_oxydans_621H
Gramella_forsetii_KT0803
Granulobacter_bethesdensis_CGDNIH1
Haemophilus_ducreyi_35000HP
Haemophilus_influenzae
Haemophilus_influenzae_86_028NP
Haemophilus_somnus_129PT
Hahella_chejuensis_KCTC_2396
Haloarcula_marismortui_ATCC_43049
Halobacterium_sp
Haloquadratum_walsbyi
Halorhodospira_halophila_SL1
Helicobacter_acinonychis_Sheeba
Helicobacter_hepaticus
Helicobacter_pylori_26695
Helicobacter_pylori_HPAG1
Helicobacter_pylori_J99
Hyperthermus_butylicus
Hyphomonas_neptunium_ATCC_15444
Idiomarina_loihiensis_L2TR
Jannaschia_CCS1
Lactobacillus_acidophilus_NCFM
Lactobacillus_brevis_ATCC_367
Lactobacillus_casei_ATCC_334
Lactobacillus_delbrueckii_bulgaricus
Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365
Lactobacillus_gasseri_ATCC_33323
Lactobacillus_johnsonii_NCC_533
Lactobacillus_plantarum
Lactobacillus_sakei_23K
Lactobacillus_salivarius_UCC118
Lactococcus_lactis
Lactococcus_lactis_cremoris_MG1363
Lactococcus_lactis_cremoris_SK11
Lawsonia_intracellularis_PHE_MN1-00
Legionella_pneumophila_Lens
Legionella_pneumophila_Paris
Legionella_pneumophila_Philadelphia_1
Leifsonia_xyli_xyli_CTCB0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_JB197
Leptospira_borgpetersenii_serovar_Hardjo-bovis_L550
Leptospira_interrogans_serovar_Copenhageni
Leptospira_interrogans_serovar_Lai
Leuconostoc_mesenteroides_ATCC_8293
Listeria_innocua
Listeria_monocytogenes
Listeria_monocytogenes_4b_F2365
Listeria_welshimeri_serovar_6b_SLCC5334
Magnetococcus_MC-1
Magnetospirillum_magneticum_AMB-1
Mannheimia_succiniciproducens_MBEL55E
Maricaulis_maris_MCS10
Marinobacter_aquaeolei_VT8
Mesoplasma_florum_L1
Mesorhizobium_BNC1
Mesorhizobium_loti
Methanobacterium_thermoautotrophicum
Methanococcoides_burtonii_DSM_6242
Methanococcus_jannaschii
Methanococcus_maripaludis_S2
Methanocorpusculum_labreanum_Z
Methanoculleus_marisnigri_JR1
Methanopyrus_kandleri
Methanosaeta_thermophila_PT
Methanosarcina_acetivorans
Methanosarcina_barkeri_fusaro
Methanosarcina_mazei
Methanosphaera_stadtmanae
Methanospirillum_hungatei_JF-1
Methylibium_petroleiphilum_PM1
Methylobacillus_flagellatus_KT
Methylococcus_capsulatus_Bath
Moorella_thermoacetica_ATCC_39073
Mycobacterium_JLS
Mycobacterium_KMS
Mycobacterium_MCS
Mycobacterium_avium_104
Mycobacterium_avium_paratuberculosis
Mycobacterium_bovis
Mycobacterium_bovis_BCG_Pasteur_1173P2
Mycobacterium_leprae
Mycobacterium_smegmatis_MC2_155
Mycobacterium_tuberculosis_CDC1551
Mycobacterium_tuberculosis_H37Rv
Mycobacterium_ulcerans_Agy99
Mycobacterium_vanbaalenii_PYR-1
Mycoplasma_capricolum_ATCC_27343
Mycoplasma_gallisepticum
Mycoplasma_genitalium
Mycoplasma_hyopneumoniae_232
Mycoplasma_hyopneumoniae_7448
Mycoplasma_hyopneumoniae_J
Mycoplasma_mobile_163K
Mycoplasma_mycoides
Mycoplasma_penetrans
Mycoplasma_pneumoniae
Mycoplasma_pulmonis
Mycoplasma_synoviae_53
Myxococcus_xanthus_DK_1622
Nanoarchaeum_equitans
Natronomonas_pharaonis
Neisseria_gonorrhoeae_FA_1090
Neisseria_meningitidis_FAM18
Neisseria_meningitidis_MC58
Neisseria_meningitidis_Z2491
Neorickettsia_sennetsu_Miyayama
Nitrobacter_hamburgensis_X14
Nitrobacter_winogradskyi_Nb-255
Nitrosococcus_oceani_ATCC_19707
Nitrosomonas_europaea
Nitrosomonas_eutropha_C71
Nitrosospira_multiformis_ATCC_25196
Nocardia_farcinica_IFM10152
Nocardioides_JS614
Nostoc_sp
Novosphingobium_aromaticivorans_DSM_12444
Oceanobacillus_iheyensis
Oenococcus_oeni_PSU-1
Onion_yellows_phytoplasma
Parachlamydia_sp_UWE25
Paracoccus_denitrificans_PD1222
Pasteurella_multocida
Pediococcus_pentosaceus_ATCC_25745
Pelobacter_carbinolicus
Pelobacter_propionicus_DSM_2379
Pelodictyon_luteolum_DSM_273
Photobacterium_profundum_SS9
Photorhabdus_luminescens
Picrophilus_torridus_DSM_9790
Pirellula_sp
Polaromonas_JS666
Polaromonas_naphthalenivorans_CJ2
Porphyromonas_gingivalis_W83
Prochlorococcus_marinus_AS9601
Prochlorococcus_marinus_CCMP1375
Prochlorococcus_marinus_MED4
Prochlorococcus_marinus_MIT9313
Prochlorococcus_marinus_MIT_9301
Prochlorococcus_marinus_MIT_9303
Prochlorococcus_marinus_MIT_9312
Prochlorococcus_marinus_MIT_9515
Prochlorococcus_marinus_NATL1A
Prochlorococcus_marinus_NATL2A
Propionibacterium_acnes_KPA171202
Pseudoalteromonas_atlantica_T6c
Pseudoalteromonas_haloplanktis_TAC125
Pseudomonas_aeruginosa
Pseudomonas_aeruginosa_UCBPP-PA14
Pseudomonas_entomophila_L48
Pseudomonas_fluorescens_Pf-5
Pseudomonas_fluorescens_PfO-1
Pseudomonas_putida_KT2440
Pseudomonas_syringae_phaseolicola_1448A
Pseudomonas_syringae_pv_B728a
Pseudomonas_syringae_tomato_DC3000
Psychrobacter_arcticum_273-4
Psychrobacter_cryohalolentis_K5
Psychromonas_ingrahamii_37
Pyrobaculum_aerophilum
Pyrobaculum_calidifontis_JCM_11548
Pyrobaculum_islandicum_DSM_4184
Pyrococcus_abyssi
Pyrococcus_furiosus
Pyrococcus_horikoshii
Ralstonia_eutropha_H16
Ralstonia_eutropha_JMP134
Ralstonia_metallidurans_CH34
Ralstonia_solanacearum
Rhizobium_etli_CFN_42
Rhizobium_leguminosarum_bv_viciae_3841
Rhodobacter_sphaeroides_2_4_1
Rhodobacter_sphaeroides_ATCC_17029
Rhodococcus_RHA1
Rhodoferax_ferrireducens_T118
Rhodopseudomonas_palustris_BisA53
Rhodopseudomonas_palustris_BisB18
Rhodopseudomonas_palustris_BisB5
Rhodopseudomonas_palustris_CGA009
Rhodopseudomonas_palustris_HaA2
Rhodospirillum_rubrum_ATCC_11170
Rickettsia_bellii_RML369-C
Rickettsia_conorii
Rickettsia_felis_URRWXCal2
Rickettsia_prowazekii
Rickettsia_typhi_wilmington
Roseobacter_denitrificans_OCh_114
Rubrobacter_xylanophilus_DSM_9941
Saccharophagus_degradans_2-40
Salinibacter_ruber_DSM_13855
Salmonella_enterica_Choleraesuis
Salmonella_enterica_Paratypi_ATCC_9150
Salmonella_typhi
Salmonella_typhi_Ty2
Salmonella_typhimurium_LT2
Shewanella_ANA-3
Shewanella_MR-4
Shewanella_MR-7
Shewanella_W3-18-1
Shewanella_amazonensis_SB2B
Shewanella_baltica_OS155
Shewanella_denitrificans_OS217
Shewanella_frigidimarina_NCIMB_400
Shewanella_loihica_PV-4
Shewanella_oneidensis
Shigella_boydii_Sb227
Shigella_dysenteriae
Shigella_flexneri_2a
Shigella_flexneri_2a_2457T
Shigella_flexneri_5_8401
Shigella_sonnei_Ss046
Silicibacter_TM1040
Silicibacter_pomeroyi_DSS-3
Sinorhizobium_meliloti
Sodalis_glossinidius_morsitans
Solibacter_usitatus_Ellin6076
Sphingopyxis_alaskensis_RB2256
Staphylococcus_aureus_COL
Staphylococcus_aureus_MW2
Staphylococcus_aureus_Mu50
Staphylococcus_aureus_N315
Staphylococcus_aureus_NCTC_8325
Staphylococcus_aureus_RF122
Staphylococcus_aureus_USA300
Staphylococcus_aureus_aureus_MRSA252
Staphylococcus_aureus_aureus_MSSA476
Staphylococcus_epidermidis_ATCC_12228
Staphylococcus_epidermidis_RP62A
Staphylococcus_haemolyticus
Staphylococcus_saprophyticus
Staphylothermus_marinus_F1
Streptococcus_agalactiae_2603
Streptococcus_agalactiae_A909
Streptococcus_agalactiae_NEM316
Streptococcus_mutans
Streptococcus_pneumoniae_D39
Streptococcus_pneumoniae_R6
Streptococcus_pneumoniae_TIGR4
Streptococcus_pyogenes_M1_GAS
Streptococcus_pyogenes_MGAS10270
Streptococcus_pyogenes_MGAS10394
Streptococcus_pyogenes_MGAS10750
Streptococcus_pyogenes_MGAS2096
Streptococcus_pyogenes_MGAS315
Streptococcus_pyogenes_MGAS5005
Streptococcus_pyogenes_MGAS6180
Streptococcus_pyogenes_MGAS8232
Streptococcus_pyogenes_MGAS9429
Streptococcus_pyogenes_SSI-1
Streptococcus_sanguinis_SK36
Streptococcus_thermophilus_CNRZ1066
Streptococcus_thermophilus_LMD-9
Streptococcus_thermophilus_LMG_18311
Streptomyces_avermitilis
Streptomyces_coelicolor
Sulfolobus_acidocaldarius_DSM_639
Sulfolobus_solfataricus
Sulfolobus_tokodaii
Symbiobacterium_thermophilum_IAM14863
Synechococcus_CC9311
Synechococcus_CC9605
Synechococcus_CC9902
Synechococcus_elongatus_PCC_6301
Synechococcus_elongatus_PCC_7942
Synechococcus_sp_WH8102
Synechocystis_PCC6803
Syntrophobacter_fumaroxidans_MPOB
Syntrophomonas_wolfei_Goettingen
Syntrophus_aciditrophicus_SB
Thermoanaerobacter_tengcongensis
Thermobifida_fusca_YX
Thermococcus_kodakaraensis_KOD1
Thermofilum_pendens_Hrk_5
Thermoplasma_acidophilum
Thermoplasma_volcanium
Thermosynechococcus_elongatus
Thermotoga_maritima
Thermus_thermophilus_HB27
Thermus_thermophilus_HB8
Thiobacillus_denitrificans_ATCC_25259
Thiomicrospira_crunogena_XCL-2
Thiomicrospira_denitrificans_ATCC_33889
Treponema_denticola_ATCC_35405
Treponema_pallidum
Trichodesmium_erythraeum_IMS101
Tropheryma_whipplei_TW08_27
Tropheryma_whipplei_Twist
Ureaplasma_urealyticum
Verminephrobacter_eiseniae_EF01-2
Vibrio_cholerae
Vibrio_fischeri_ES114
Vibrio_parahaemolyticus
Vibrio_vulnificus_CMCP6
Vibrio_vulnificus_YJ016
Wigglesworthia_brevipalpis
Wolbachia_endosymbiont_of_Brugia_malayi_TRS
Wolbachia_endosymbiont_of_Drosophila_melanogaster
Wolinella_succinogenes
Xanthomonas_campestris
Xanthomonas_campestris_8004
Xanthomonas_campestris_vesicatoria_85-10
Xanthomonas_citri
Xanthomonas_oryzae_KACC10331
Xanthomonas_oryzae_MAFF_311018
Xylella_fastidiosa
Xylella_fastidiosa_Temecula1
Yersinia_enterocolitica_8081
Yersinia_pestis_Antiqua
Yersinia_pestis_CO92
Yersinia_pestis_KIM
Yersinia_pestis_Nepal516
Yersinia_pestis_biovar_Mediaevails
Yersinia_pseudotuberculosis_IP32953
Zymomonas_mobilis_ZM4
refset based
genome based
Organism 5:
none
Acidobacteria_bacterium_Ellin345
Acidothermus_cellulolyticus_11B
Acidovorax_JS42
Acidovorax_avenae_citrulli_AAC00-1
Acinetobacter_baumannii_ATCC_17978
Acinetobacter_sp_ADP1
Actinobacillus_pleuropneumoniae_L20
Aeromonas_hydrophila_ATCC_7966
Aeropyrum_pernix
Agrobacterium_tumefaciens_C58_Cereon
Agrobacterium_tumefaciens_C58_UWash
Alcanivorax_borkumensis_SK2
Alkalilimnicola_ehrlichei_MLHE-1
Anabaena_variabilis_ATCC_29413
Anaeromyxobacter_dehalogenans_2CP-C
Anaplasma_marginale_St_Maries
Anaplasma_phagocytophilum_HZ
Aquifex_aeolicus
Archaeoglobus_fulgidus
Arthrobacter_FB24
Arthrobacter_aurescens_TC1
Aster_yellows_witches-broom_phytoplasma_AYWB
Azoarcus_BH72
Azoarcus_sp_EbN1
Bacillus_anthracis_Ames
Bacillus_anthracis_Ames_0581
Bacillus_anthracis_str_Sterne
Bacillus_cereus_ATCC14579
Bacillus_cereus_ATCC_10987
Bacillus_cereus_ZK
Bacillus_clausii_KSM-K16
Bacillus_halodurans
Bacillus_licheniformis_ATCC_14580
Bacillus_licheniformis_DSM_13
Bacillus_subtilis
Bacillus_thuringiensis_Al_Hakam
Bacillus_thuringiensis_konkukian
Bacteroides_fragilis_NCTC_9434
Bacteroides_fragilis_YCH46
Bacteroides_thetaiotaomicron_VPI-5482
Bartonella_bacilliformis_KC583
Bartonella_henselae_Houston-1
Bartonella_quintana_Toulouse
Baumannia_cicadellinicola_Homalodisca_coagulata
Bdellovibrio_bacteriovorus
Bifidobacterium_adolescentis_ATCC_15703
Bifidobacterium_longum
Bordetella_bronchiseptica
Bordetella_parapertussis
Bordetella_pertussis
Borrelia_afzelii_PKo
Borrelia_burgdorferi
Borrelia_garinii_PBi
Bradyrhizobium_japonicum
Brucella_abortus_9-941
Brucella_melitensis
Brucella_melitensis_biovar_Abortus
Brucella_suis_1330
Buchnera_aphidicola
Buchnera_aphidicola_Cc_Cinara_cedri
Buchnera_aphidicola_Sg
Buchnera_sp
Burkholderia_383
Burkholderia_cenocepacia_AU_1054
Burkholderia_cenocepacia_HI2424
Burkholderia_cepacia_AMMD
Burkholderia_mallei_ATCC_23344
Burkholderia_mallei_NCTC_10229
Burkholderia_mallei_NCTC_10247
Burkholderia_mallei_SAVP1
Burkholderia_pseudomallei_1106a
Burkholderia_pseudomallei_1710b
Burkholderia_pseudomallei_668
Burkholderia_pseudomallei_K96243
Burkholderia_thailandensis_E264
Burkholderia_xenovorans_LB400
Campylobacter_fetus_82-40
Campylobacter_jejuni
Campylobacter_jejuni_81-176
Campylobacter_jejuni_RM1221
Candidatus_Blochmannia_floridanus
Candidatus_Blochmannia_pennsylvanicus_BPEN
Candidatus_Carsonella_ruddii
Candidatus_Carsonella_ruddii_PV
Candidatus_Pelagibacter_ubique_HTCC1062
Candidatus_Ruthia_magnifica_Cm_Calyptogena_magnifica_
Carboxydothermus_hydrogenoformans_Z-2901
Caulobacter_crescentus
Chlamydia_muridarum
Chlamydia_trachomatis
Chlamydia_trachomatis_A_HAR-13
Chlamydophila_abortus_S26_3
Chlamydophila_caviae
Chlamydophila_felis_Fe_C-56
Chlamydophila_pneumoniae_AR39
Chlamydophila_pneumoniae_CWL029
Chlamydophila_pneumoniae_J138
Chlamydophila_pneumoniae_TW_183
Chlorobium_chlorochromatii_CaD3
Chlorobium_phaeobacteroides_DSM_266
Chlorobium_tepidum_TLS
Chromobacterium_violaceum
Chromohalobacter_salexigens_DSM_3043
Clostridium_acetobutylicum
Clostridium_difficile_630
Clostridium_novyi_NT
Clostridium_perfringens
Clostridium_perfringens_ATCC_13124
Clostridium_perfringens_SM101
Clostridium_tetani_E88
Clostridium_thermocellum_ATCC_27405
Colwellia_psychrerythraea_34H
Corynebacterium_diphtheriae
Corynebacterium_efficiens_YS-314
Corynebacterium_glutamicum_ATCC_13032_Bielefeld
Corynebacterium_glutamicum_ATCC_13032_Kitasato
Corynebacterium_jeikeium_K411
Coxiella_burnetii
Cyanobacteria_bacterium_Yellowstone_A-Prime
Cyanobacteria_bacterium_Yellowstone_B-Prime
Cytophaga_hutchinsonii_ATCC_33406
Dechloromonas_aromatica_RCB
Dehalococcoides_CBDB1
Dehalococcoides_ethenogenes_195
Deinococcus_geothermalis_DSM_11300
Deinococcus_radiodurans
Desulfitobacterium_hafniense_Y51
Desulfotalea_psychrophila_LSv54
Desulfovibrio_desulfuricans_G20
Desulfovibrio_vulgaris_DP4
Desulfovibrio_vulgaris_Hildenborough
Ehrlichia_canis_Jake
Ehrlichia_chaffeensis_Arkansas
Ehrlichia_ruminantium_Gardel
Ehrlichia_ruminantium_Welgevonden
Enterococcus_faecalis_V583
Erwinia_carotovora_atroseptica_SCRI1043
Erythrobacter_litoralis_HTCC2594
Escherichia_coli_536
Escherichia_coli_APEC_O1
Escherichia_coli_CFT073
Escherichia_coli_K12
Escherichia_coli_O157H7
Escherichia_coli_O157H7_EDL933
Escherichia_coli_UTI89
Escherichia_coli_W3110
Francisella_tularensis_FSC_198
Francisella_tularensis_holarctica
Francisella_tularensis_holarctica_OSU18
Francisella_tularensis_novicida_U112
Francisella_tularensis_tularensis
Frankia_CcI3
Frankia_alni_ACN14a
Fusobacterium_nucleatum
Geobacillus_kaustophilus_HTA426
Geobacter_metallireducens_GS-15
Geobacter_sulfurreducens
Gloeobacter_violaceus
Gluconobacter_oxydans_621H
Gramella_forsetii_KT0803
Granulobacter_bethesdensis_CGDNIH1
Haemophilus_ducreyi_35000HP
Haemophilus_influenzae
Haemophilus_influenzae_86_028NP
Haemophilus_somnus_129PT
Hahella_chejuensis_KCTC_2396
Haloarcula_marismortui_ATCC_43049
Halobacterium_sp
Haloquadratum_walsbyi
Halorhodospira_halophila_SL1
Helicobacter_acinonychis_Sheeba
Helicobacter_hepaticus
Helicobacter_pylori_26695
Helicobacter_pylori_HPAG1
Helicobacter_pylori_J99
Hyperthermus_butylicus
Hyphomonas_neptunium_ATCC_15444
Idiomarina_loihiensis_L2TR
Jannaschia_CCS1
Lactobacillus_acidophilus_NCFM
Lactobacillus_brevis_ATCC_367
Lactobacillus_casei_ATCC_334
Lactobacillus_delbrueckii_bulgaricus
Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365
Lactobacillus_gasseri_ATCC_33323
Lactobacillus_johnsonii_NCC_533
Lactobacillus_plantarum
Lactobacillus_sakei_23K
Lactobacillus_salivarius_UCC118
Lactococcus_lactis
Lactococcus_lactis_cremoris_MG1363
Lactococcus_lactis_cremoris_SK11
Lawsonia_intracellularis_PHE_MN1-00
Legionella_pneumophila_Lens
Legionella_pneumophila_Paris
Legionella_pneumophila_Philadelphia_1
Leifsonia_xyli_xyli_CTCB0
Leptospira_borgpetersenii_serovar_Hardjo-bovis_JB197
Leptospira_borgpetersenii_serovar_Hardjo-bovis_L550
Leptospira_interrogans_serovar_Copenhageni
Leptospira_interrogans_serovar_Lai
Leuconostoc_mesenteroides_ATCC_8293
Listeria_innocua
Listeria_monocytogenes
Listeria_monocytogenes_4b_F2365
Listeria_welshimeri_serovar_6b_SLCC5334
Magnetococcus_MC-1
Magnetospirillum_magneticum_AMB-1
Mannheimia_succiniciproducens_MBEL55E
Maricaulis_maris_MCS10
Marinobacter_aquaeolei_VT8
Mesoplasma_florum_L1
Mesorhizobium_BNC1
Mesorhizobium_loti
Methanobacterium_thermoautotrophicum
Methanococcoides_burtonii_DSM_6242
Methanococcus_jannaschii
Methanococcus_maripaludis_S2
Methanocorpusculum_labreanum_Z
Methanoculleus_marisnigri_JR1
Methanopyrus_kandleri
Methanosaeta_thermophila_PT
Methanosarcina_acetivorans
Methanosarcina_barkeri_fusaro
Methanosarcina_mazei
Methanosphaera_stadtmanae
Methanospirillum_hungatei_JF-1
Methylibium_petroleiphilum_PM1
Methylobacillus_flagellatus_KT
Methylococcus_capsulatus_Bath
Moorella_thermoacetica_ATCC_39073
Mycobacterium_JLS
Mycobacterium_KMS
Mycobacterium_MCS
Mycobacterium_avium_104
Mycobacterium_avium_paratuberculosis
Mycobacterium_bovis
Mycobacterium_bovis_BCG_Pasteur_1173P2
Mycobacterium_leprae
Mycobacterium_smegmatis_MC2_155
Mycobacterium_tuberculosis_CDC1551
Mycobacterium_tuberculosis_H37Rv
Mycobacterium_ulcerans_Agy99
Mycobacterium_vanbaalenii_PYR-1
Mycoplasma_capricolum_ATCC_27343
Mycoplasma_gallisepticum
Mycoplasma_genitalium
Mycoplasma_hyopneumoniae_232
Mycoplasma_hyopneumoniae_7448
Mycoplasma_hyopneumoniae_J
Mycoplasma_mobile_163K
Mycoplasma_mycoides
Mycoplasma_penetrans
Mycoplasma_pneumoniae
Mycoplasma_pulmonis
Mycoplasma_synoviae_53
Myxococcus_xanthus_DK_1622
Nanoarchaeum_equitans
Natronomonas_pharaonis
Neisseria_gonorrhoeae_FA_1090
Neisseria_meningitidis_FAM18
Neisseria_meningitidis_MC58
Neisseria_meningitidis_Z2491
Neorickettsia_sennetsu_Miyayama
Nitrobacter_hamburgensis_X14
Nitrobacter_winogradskyi_Nb-255
Nitrosococcus_oceani_ATCC_19707
Nitrosomonas_europaea
Nitrosomonas_eutropha_C71
Nitrosospira_multiformis_ATCC_25196
Nocardia_farcinica_IFM10152
Nocardioides_JS614
Nostoc_sp
Novosphingobium_aromaticivorans_DSM_12444
Oceanobacillus_iheyensis
Oenococcus_oeni_PSU-1
Onion_yellows_phytoplasma
Parachlamydia_sp_UWE25
Paracoccus_denitrificans_PD1222
Pasteurella_multocida
Pediococcus_pentosaceus_ATCC_25745
Pelobacter_carbinolicus
Pelobacter_propionicus_DSM_2379
Pelodictyon_luteolum_DSM_273
Photobacterium_profundum_SS9
Photorhabdus_luminescens
Picrophilus_torridus_DSM_9790
Pirellula_sp
Polaromonas_JS666
Polaromonas_naphthalenivorans_CJ2
Porphyromonas_gingivalis_W83
Prochlorococcus_marinus_AS9601
Prochlorococcus_marinus_CCMP1375
Prochlorococcus_marinus_MED4
Prochlorococcus_marinus_MIT9313
Prochlorococcus_marinus_MIT_9301
Prochlorococcus_marinus_MIT_9303
Prochlorococcus_marinus_MIT_9312
Prochlorococcus_marinus_MIT_9515
Prochlorococcus_marinus_NATL1A
Prochlorococcus_marinus_NATL2A
Propionibacterium_acnes_KPA171202
Pseudoalteromonas_atlantica_T6c
Pseudoalteromonas_haloplanktis_TAC125
Pseudomonas_aeruginosa
Pseudomonas_aeruginosa_UCBPP-PA14
Pseudomonas_entomophila_L48
Pseudomonas_fluorescens_Pf-5
Pseudomonas_fluorescens_PfO-1
Pseudomonas_putida_KT2440
Pseudomonas_syringae_phaseolicola_1448A
Pseudomonas_syringae_pv_B728a
Pseudomonas_syringae_tomato_DC3000
Psychrobacter_arcticum_273-4
Psychrobacter_cryohalolentis_K5
Psychromonas_ingrahamii_37
Pyrobaculum_aerophilum
Pyrobaculum_calidifontis_JCM_11548
Pyrobaculum_islandicum_DSM_4184
Pyrococcus_abyssi
Pyrococcus_furiosus
Pyrococcus_horikoshii
Ralstonia_eutropha_H16
Ralstonia_eutropha_JMP134
Ralstonia_metallidurans_CH34
Ralstonia_solanacearum
Rhizobium_etli_CFN_42
Rhizobium_leguminosarum_bv_viciae_3841
Rhodobacter_sphaeroides_2_4_1
Rhodobacter_sphaeroides_ATCC_17029
Rhodococcus_RHA1
Rhodoferax_ferrireducens_T118
Rhodopseudomonas_palustris_BisA53
Rhodopseudomonas_palustris_BisB18
Rhodopseudomonas_palustris_BisB5
Rhodopseudomonas_palustris_CGA009
Rhodopseudomonas_palustris_HaA2
Rhodospirillum_rubrum_ATCC_11170
Rickettsia_bellii_RML369-C
Rickettsia_conorii
Rickettsia_felis_URRWXCal2
Rickettsia_prowazekii
Rickettsia_typhi_wilmington
Roseobacter_denitrificans_OCh_114
Rubrobacter_xylanophilus_DSM_9941
Saccharophagus_degradans_2-40
Salinibacter_ruber_DSM_13855
Salmonella_enterica_Choleraesuis
Salmonella_enterica_Paratypi_ATCC_9150
Salmonella_typhi
Salmonella_typhi_Ty2
Salmonella_typhimurium_LT2
Shewanella_ANA-3
Shewanella_MR-4
Shewanella_MR-7
Shewanella_W3-18-1
Shewanella_amazonensis_SB2B
Shewanella_baltica_OS155
Shewanella_denitrificans_OS217
Shewanella_frigidimarina_NCIMB_400
Shewanella_loihica_PV-4
Shewanella_oneidensis
Shigella_boydii_Sb227
Shigella_dysenteriae
Shigella_flexneri_2a
Shigella_flexneri_2a_2457T
Shigella_flexneri_5_8401
Shigella_sonnei_Ss046
Silicibacter_TM1040
Silicibacter_pomeroyi_DSS-3
Sinorhizobium_meliloti
Sodalis_glossinidius_morsitans
Solibacter_usitatus_Ellin6076
Sphingopyxis_alaskensis_RB2256
Staphylococcus_aureus_COL
Staphylococcus_aureus_MW2
Staphylococcus_aureus_Mu50
Staphylococcus_aureus_N315
Staphylococcus_aureus_NCTC_8325
Staphylococcus_aureus_RF122
Staphylococcus_aureus_USA300
Staphylococcus_aureus_aureus_MRSA252
Staphylococcus_aureus_aureus_MSSA476
Staphylococcus_epidermidis_ATCC_12228
Staphylococcus_epidermidis_RP62A
Staphylococcus_haemolyticus
Staphylococcus_saprophyticus
Staphylothermus_marinus_F1
Streptococcus_agalactiae_2603
Streptococcus_agalactiae_A909
Streptococcus_agalactiae_NEM316
Streptococcus_mutans
Streptococcus_pneumoniae_D39
Streptococcus_pneumoniae_R6
Streptococcus_pneumoniae_TIGR4
Streptococcus_pyogenes_M1_GAS
Streptococcus_pyogenes_MGAS10270
Streptococcus_pyogenes_MGAS10394
Streptococcus_pyogenes_MGAS10750
Streptococcus_pyogenes_MGAS2096
Streptococcus_pyogenes_MGAS315
Streptococcus_pyogenes_MGAS5005
Streptococcus_pyogenes_MGAS6180
Streptococcus_pyogenes_MGAS8232
Streptococcus_pyogenes_MGAS9429
Streptococcus_pyogenes_SSI-1
Streptococcus_sanguinis_SK36
Streptococcus_thermophilus_CNRZ1066
Streptococcus_thermophilus_LMD-9
Streptococcus_thermophilus_LMG_18311
Streptomyces_avermitilis
Streptomyces_coelicolor
Sulfolobus_acidocaldarius_DSM_639
Sulfolobus_solfataricus
Sulfolobus_tokodaii
Symbiobacterium_thermophilum_IAM14863
Synechococcus_CC9311
Synechococcus_CC9605
Synechococcus_CC9902
Synechococcus_elongatus_PCC_6301
Synechococcus_elongatus_PCC_7942
Synechococcus_sp_WH8102
Synechocystis_PCC6803
Syntrophobacter_fumaroxidans_MPOB
Syntrophomonas_wolfei_Goettingen
Syntrophus_aciditrophicus_SB
Thermoanaerobacter_tengcongensis
Thermobifida_fusca_YX
Thermococcus_kodakaraensis_KOD1
Thermofilum_pendens_Hrk_5
Thermoplasma_acidophilum
Thermoplasma_volcanium
Thermosynechococcus_elongatus
Thermotoga_maritima
Thermus_thermophilus_HB27
Thermus_thermophilus_HB8
Thiobacillus_denitrificans_ATCC_25259
Thiomicrospira_crunogena_XCL-2
Thiomicrospira_denitrificans_ATCC_33889
Treponema_denticola_ATCC_35405
Treponema_pallidum
Trichodesmium_erythraeum_IMS101
Tropheryma_whipplei_TW08_27
Tropheryma_whipplei_Twist
Ureaplasma_urealyticum
Verminephrobacter_eiseniae_EF01-2
Vibrio_cholerae
Vibrio_fischeri_ES114
Vibrio_parahaemolyticus
Vibrio_vulnificus_CMCP6
Vibrio_vulnificus_YJ016
Wigglesworthia_brevipalpis
Wolbachia_endosymbiont_of_Brugia_malayi_TRS
Wolbachia_endosymbiont_of_Drosophila_melanogaster
Wolinella_succinogenes
Xanthomonas_campestris
Xanthomonas_campestris_8004
Xanthomonas_campestris_vesicatoria_85-10
Xanthomonas_citri
Xanthomonas_oryzae_KACC10331
Xanthomonas_oryzae_MAFF_311018
Xylella_fastidiosa
Xylella_fastidiosa_Temecula1
Yersinia_enterocolitica_8081
Yersinia_pestis_Antiqua
Yersinia_pestis_CO92
Yersinia_pestis_KIM
Yersinia_pestis_Nepal516
Yersinia_pestis_biovar_Mediaevails
Yersinia_pseudotuberculosis_IP32953
Zymomonas_mobilis_ZM4
refset based
genome based
Output type:
graphic
textual
Last modified:
May 30 2007